Hi all,
I'm running USPEX v10.6 (updated from the 10.5 base install via the update_files.zip patch) with the Quantum ESPRESSO interface (abinitioCode = 8, QE 7.3.1) for a VCNEB phase-transition-pathway calculation (SiO2, rutile-type -> columbite-type, 11 images, 160 GPa). I'm running into a reproducible bug where the calculation always stops after VCNEB Step 2, with a truncated report and no error message.
SYMPTOMThe run proceeds normally through the initial step and Step 1 (all images relax, energies and forces reported normally, activation energy printed correctly). At Step 2, only Image 1 is evaluated, the activation energy lines are printed blank, and the run terminates cleanly (exit status 0, no MATLAB error, no QE error) with:
VCNEB Calculation Step 2 finished ....... THE VCNEB JOB finished !I initially suspected this was a legitimate convergence (ConvThreshold met), but I've since ruled that out -- see below.
WHAT I'VE RULED OUTI've reproduced this exact failure (truncation at Step 2, blank activation energy) across the following independently-varied settings, all with the same 11-image seed pathway and same QE Specific/ files:
In every combination, the trajectory through the initial step and Step 1 is physically reasonable (energies decrease sensibly toward lower activation energy from Step 0 to Step 1: 21.956 eV -> 19.234 eV in the run below), and QE itself completes every single-point SCF call cleanly (JOB DONE, no errors) right up to and including the truncation point.
REPRESENTATIVE INPUT.txtVCNEB : calculationMethod
% numSpecies 4 8 % EndNumSpecies
% atomType Si O % EndAtomType
160.0 : ExternalPressure 111 : vcnebType 11 : numImages 500 : numSteps 1 : optimizerType 1 : optReadImages 2 : optRelaxType 0.1 : dt 0.0002 : ConvThreshold 1.0 : VarPathLength 15 : K_min 30 : K_max 0 : optFreezing 0 : optMethodCIDI 2 : FormatType 1 : PrintStep % abinitioCode 8 % ENDabinit % commandExecutable mpirun pw.x < qe.in > output % EndExecutable 1 : numParallelCalcs % KresolStart 0.20 % Kresolend
Images file uses optReadImages=1 with independently DFT-relaxed endpoints (VASP5 POSCAR format, Image_ini / Image_end labels).
RELEVANT VCNEBReports EXCERPT (optRelaxType=2 run)------------------------------ VCNEB step : 2 ----------------------------- Cell Forces RMS(eV/A) Atom Forces RMS(eV/A) Image Energy-(eV) Total, Project, Elastic Total, Project, Elastic F Dist SpaceG 1 -3912.0535 [ 15.832, 15.832, 0.000] [ 0.000, 0.000, 0.000] 0 0.0000 58
Activation energy (->) = eV Activation energy (<-) = eV
===================================== VCNEB DONE ====================================
Only Image 1 (a fixed endpoint) is listed; Images 2-11 are simply missing from this step's block, and the activation energy fields are blank rather than 0.000 or any numeric value -- this looks like the report-writing routine is being cut off mid-write, rather than the calculation genuinely completing.
SEPARATE, POSSIBLY RELATED NOTE ON KresolStartIndependently of the above, I could not get KresolStart to influence the k-point mesh at all for VCNEB+QE -- 0.40 and 0.20 both produced an auto-appended "K_POINTS {automatic} / 2 2 2 0 0 0" card in the generated qe.in. I don't know whether this is related to the Step 2 truncation, but wanted to mention it in case it's a symptom of the same underlying issue in how VCNEB's QE interface consumes INPUT.txt options.
QUESTIONSHappy to share the full run directory (INPUT.txt, Images, Specific/qEspresso_options_1, and stdout logs from four independent runs reproducing this) if useful.
Possibly related: a recent thread here ("USPEX 10.6 VCNEB continues running although all printed RMS forces are below ConvThreshold," Jeff Armstrong, Aug 6) reports what looks like the inverse symptom -- VCNEB failing to stop when it should, rather than stopping when it shouldn't -- using the VASP interface (abinitioCode=1) rather than QE. Given both issues involve the convergence-check/reporting logic around ConvThreshold, they may share a root cause and could be worth looking at together.
Thanks very much for any pointers.
Ken Park
Baylor University