when update uspex python new version with latest python package?
12 views
Skip to first unread message
Kurban Magomedov
Jul 1, 2024, 2:18:16 AMJul 1
to USPEX
Hello!
some error :
~/Downloads/examples/EX02-3D_MgAl2O4_gulp$ uspex -r
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
and error in EXAMPLE_31 with vasp 6.3.0 not running. how solve it?
~/Downloads/examples/EX02-3D_MgAl2O4_gulp$ uspex -r
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
/home/kurban/anaconda3/envs/env2/lib/python3.9/asyncio/base_events.py:1905: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
handle._run()
/home/kurban/anaconda3/envs/env2/lib/python3.9/site-packages/USPEX/IO/AtomisticRepresentation.py:565: FutureWarning: `rcond` parameter will change to the default of machine precision times ``max(M, N)`` where M and N are the input matrix dimensions.
To use the future default and silence this warning we advise to pass `rcond=None`, to keep using the old, explicitly pass `rcond=-1`.
approximateVolume = ' '.join(f'{float(vol):.4} A^3' for vol in np.linalg.lstsq(numBlocks, volumes)[0])
and error in EXAMPLE_31 with vasp 6.3.0 not running. how solve it?
Reply all
Reply to author
Forward
0 new messages