I am trying to run a single season occupancy model. Each point location had between 4-7 visits, with most having 6 visits. I am running into an error when trying to create the unmarked frame - Error in FUN(X{{i}}, ...): At least one element of obsCovs in not a matrix or a data frame.
I have went though and tested each object included, as well as converted my data in both a matrix and data frame. I have also included a mix of different covariates to see where the issue lies with no luck. Any help would be greatly appreciated! I can post code from the console if that would be more helpful as well.
data <- read.csv("Occupancy_Playback_Data.csv")
head(data)
data[data == ""] <- NA
as.matrix(data)
library(unmarked)
# Covariates
date <- as.data.frame(data[,10:16])
lunar <- data[,17:23]
pressure <- data[,24:30]
sky <- as.data.frame(data[,31:37])
temp <- data[,38:44]
wind <- data[,45:51]
noise <- data[,52:58]
playback <- as.matrix(data[,59:65])
time <- data[,66:72]
y = data[,1:7] # these are the detection histories
n <- nrow(data)
siteCovs <- data$Site
covs <- data.frame(data[,7:72])
obsCovs <- list(date = date, # dates and covariates
ivel = c(playback))
obsCovs2 <- list(date = data[,10:16],
ivel = c(lunar, pressure, sky, temp, wind, noise, playback, time))
umf <- unmarkedFrameOccu(y = y, siteCovs = siteCovs, obsCovs = obsCovs2)