Installation error during "make"

[Lorenzo Pietrangeli]

Hello,

I'm trying to install ukb-0.1.6, but on the stdout I got the follow error:

g++ -c -O3 -Wall -Wno-deprecated -o globalVars.o -I /opt/boost_1_50_0/ globalVars.cc

g++ -c -O3 -Wall -Wno-deprecated -o fileElem.o -I /opt/boost_1_50_0/ fileElem.cc

fileElem.cc: In function ‘std::string ukb::path_string(const boost::filesystem::path&)’:

fileElem.cc:20: error: ‘const class boost::filesystem::path’ has no member named ‘file_string’

fileElem.cc: In function ‘std::vector<std::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::basic_string<char, std::char_traits<char>, std::allocator<char> > > > ukb::extract_input_files(const std::string&, const std::string&)’:

fileElem.cc:56: error: ‘class boost::filesystem::directory_entry’ has no member named ‘leaf’

fileElem.cc: In function ‘bool ukb::exists_file(const std::string&)’:

fileElem.cc:78: error: invalid conversion from ‘bool (*)(const std::string&)’ to ‘void*’

fileElem.cc:78: error:   initializing argument 2 of ‘boost::filesystem::path::path(const Source&, typename boost::enable_if<boost::filesystem::path_traits::is_pathable<typename boost::decay<T>::type>, void>::type*) [with Source = std::basic_string<char, std::char_traits<char>, std::allocator<char> >]’

fileElem.cc: In function ‘std::string ukb::basename(const std::string&)’:

fileElem.cc:91: error: invalid conversion from ‘bool (*)(const std::string&)’ to ‘void*’

fileElem.cc:91: error:   initializing argument 2 of ‘boost::filesystem::path::path(const Source&, typename boost::enable_if<boost::filesystem::path_traits::is_pathable<typename boost::decay<T>::type>, void>::type*) [with Source = std::basic_string<char, std::char_traits<char>, std::allocator<char> >]’

fileElem.cc:93: error: conversion from ‘boost::filesystem::path’ to non-scalar type ‘std::string’ requested

fileElem.cc: In member function ‘void ukb::File_elem::fill(const std::string&)’:

fileElem.cc:136: error: conversion from ‘boost::filesystem::path’ to non-scalar type ‘std::basic_string<char, std::char_traits<char>, std::allocator<char> >’ requested

fileElem.cc: In function ‘std::string ukb::dir_string(const Dir&) [with Dir = boost::filesystem::directory_entry]’:

fileElem.cc:62:   instantiated from here

fileElem.cc:30: error: ‘const class boost::filesystem::path’ has no member named ‘file_string’

/opt/boost_1_50_0/boost/system/error_code.hpp: At global scope:

/opt/boost_1_50_0/boost/system/error_code.hpp:214: warning: ‘boost::system::posix_category’ defined but not used

/opt/boost_1_50_0/boost/system/error_code.hpp:215: warning: ‘boost::system::errno_ecat’ defined but not used

/opt/boost_1_50_0/boost/system/error_code.hpp:216: warning: ‘boost::system::native_ecat’ defined but not used

make: *** [fileElem.o] Error 1

What can I do?

Further details:

• MacOsX Lion
• Boost 1.50.0

[Aitor Soroa]

Hi Lorenzo,

On Tue, Jul 03, 2012 at 06:03:16AM -0700, Lorenzo Pietrangeli wrote:
> Hello,
> I'm trying to install ukb-0.1.6, but on the stdout I got the follow error:
>

> ...

>
> make: *** [fileElem.o] Error 1
>
> What can I do?
>
> Further details:
>

> - MacOsX Lion
> - Boost 1.50.0

the problem is in the boost version. You have several options:

- use boost version 1.43 or less

- get the ukb source code from github:

https://github.com/asoroa/ukb

check out the v0.1.6r2 tag and compile this version.

you can also compile the last version of the source code (which
corresponds to ukb 2.0. I expect to 'oficially' launch version 2.0 in a
few days, but in the meantime you have the source code there).

best,
aitor

[Lorenzo Pietrangeli]

Thank you Aitor, it works (obviously)!

Best,
Lorenzo