GDC-PANCAN missing files
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CR F
Nov 6, 2024, 1:34:15 PMNov 6
to UCSC Xena and Cancer Genomics Browser
A substantial amount of data has been removed from the GDC-PANCAN normalized dataset and it is no longer useful.
Is there an ETA when this problem will be solved?
Best regards
Best regards
Carlos
Mary Goldman
Nov 6, 2024, 5:59:49 PMNov 6
to CR F, UCSC Xena and Cancer Genomics Browser
Hi Carlos,
We have recently updated the GDC data and retired the 2019 data you are referencing to another location: https://xenabrowser.net/datapages/?host=https%3A%2F%2FgdcV18.xenahubs.net&removeHub=https%3A%2F%2Fgdc.xenahubs.net. At this point in time we have not regenerated the GDC PanCan datasets on the new data from the GDC.
The 2019 GDC data will only be available for visualization until October 2025. After October 2025 it will only be available for download.
Let us know if you have any questions.
Best,
Mary
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Mary Goldman (she/her), Design and Outreach Engineer
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