You received this message because you are subscribed to the Google Groups "TVB Users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to tvb-users+...@googlegroups.com.
To view this discussion on the web visit https://groups.google.com/d/msgid/tvb-users/66a9482a-c429-4fc4-af10-d6984fcf3ac0n%40googlegroups.com.
On 6 Sep 2022, at 14:13, Silvana Huertas <s.huert...@gmail.com> wrote:
If I understand correctly, I will need to average the SimNIBS output per region, having a total number of regions equal to the ones I'm using for the model, right? (For example 74 if I use the predefine connectome of TVB).
I checked the code you sent me, but it is not that clear to me how to input the SimNIBS output at each time point since the output from SimNIBS is static in time.Additionally, those this means that I need to input the SimNIBS averaged output and the sinusoidal stimulus (tACS)?
you can find the TVB demo datasets here
under the folder surfaceData you have a few relevant zip files, which will have face & vertex information in them.
You can also generate such files if you've processed a T1 with a tool like FreeSurfer.
FreeSurfer is used to generate the meshes, yes. There's an optional step of resampling to lower resolution. The meshes are then converted to the simpler txt format by a Python script