Question about Fast_TVB/TVB_C

[Nephiloso Wu]

Hi all,

I'm trying to run my own simulation on EBrain. I read the script TVB_C.ipynb on the drive and realized that the simulation is actually packed in the docker container. Also, the script seems to be implemented specifically for the Deco-Wang model.

So my question is: Can I run my own simulation with Fast_TVB, or should I parallelize my simulation by myself? Thank you.

Regards,

Peixuan

[Michiel van der Vlag]

Hi Peixuan, 

The fast tvb is only set for a single model indeed. 

There are numerous models parallelized for the GPU which are part of RateML which can be found here: https://github.com/the-virtual-brain/tvb-root/tree/master/scientific_library/tvb/rateML/generatedModels. These can be run on Nvidia gpus with the driver found here: https://github.com/the-virtual-brain/tvb-root/tree/master/scientific_library/tvb/rateML/run/model_driver.py. RateML enables you to build your own models and parallelize them for the GPU starting from a XML file. 

Kind regards,

Michiel.

Op vr 13 mei 2022 om 14:09 schreef Nephiloso Wu <neph...@gmail.com>:

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