From MRI to connectivity matrix

[Alberto Vergani]

Dear TVB experts,

I'd like to ask what is the pipeline for obtaining the connectivity matrix suitable for TVB given by a patient case MRI.

If there are already toolbox/functions for doing that, I will appreciate any mention about.

Thanks,

Kind regards,

Alberto Vergani

[Julie Courtiol]

Dear Alberto,

Our TVB Image Processing Pipeline is available on EBRAINS here:

https://ebrains.eu/service/the-virtual-brain/#process_mri_data_sets_tvb

Best regards,

Dr. Julie Courtiol

Scientific Lab Manager, Brain Simulation Section

Charité - Universitätsmedizin Berlin

Berlin Institut of Health

Brain Simulation

Robert-Kosh-Platz 4

Charitéplatz 1 | 10117 Berlin | Germany

courtio...@gmail.com - www.brainsimulation.org

Twitter: @Courtioljulie

LinkedIn: juliecourtiol

Le 16 mai 2022 à 10:28, Alberto Vergani <verga...@gmail.com> a écrit :

Dear TVB experts,

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[Randy McIntosh]

There is also an updated version that does somewhat better with clinical data and older adults

 

https://github.com/McIntosh-Lab/tvb-ukbb

 

A preprint for the paper on the pipeline is there as well

To view this discussion on the web visit https://groups.google.com/d/msgid/tvb-users/B0D30020-D7C0-4ADF-9EDD-AB6CF7F79953%40gmail.com.