Re: trust dependence regex install erro

[Bo Li]

Thank you for the update!

Bo

On Fri, Apr 20, 2018 at 3:27 PM, <guoy...@gmail.com> wrote:

I found it because I install trust on my mac. For linux system, it's all good.

在 2018年4月20日星期五 UTC-4下午4:17:59，guoy...@gmail.com写道：

Hi all,

I tried to install trust 3.0 and 3.01, the same error occurred. Details list as below:

Processing dependencies for trust==3.0

Searching for regex

Reading https://pypi.python.org/simple/regex/

Download error on https://pypi.python.org/simple/regex/: [SSL: TLSV1_ALERT_PROTOCOL_VERSION] tlsv1 alert protocol version (_ssl.c:661) -- Some packages may not be found!

Couldn't find index page for 'regex' (maybe misspelled?)

Scanning index of all packages (this may take a while)

Reading https://pypi.python.org/simple/

Download error on https://pypi.python.org/simple/: [SSL: TLSV1_ALERT_PROTOCOL_VERSION] tlsv1 alert protocol version (_ssl.c:661) -- Some packages may not be found!

No local packages or working download links found for regex

error: Could not find suitable distribution for Requirement.parse('regex')

Can you help to figure out how to solve this?

Thanks.

Best,

Yicheng Guo

--
You received this message because you are subscribed to the Google Groups "TRUST for T cell receptor hypervariable region assembly" group.
To unsubscribe from this group and stop receiving emails from it, send an email to trusttcr+unsubscribe@googlegroups.com.
To post to this group, send email to trus...@googlegroups.com.
To view this discussion on the web visit https://groups.google.com/d/msgid/trusttcr/3d5c27ea-c051-44c1-85c5-baf0082ab959%40googlegroups.com.

For more options, visit https://groups.google.com/d/optout.

[guoy...@gmail.com]

another issue happend, I can import pysam in python, but if I run trust, it always say:  Please install pysam first: https://code.google.com/p/pysam/. Do you know why?

在 2018年4月20日星期五 UTC-4下午8:49:14，Bo Li写道：

Thank you for the update!

Bo

On Fri, Apr 20, 2018 at 3:27 PM, <guoy...@gmail.com> wrote:

I found it because I install trust on my mac. For linux system, it's all good.

在 2018年4月20日星期五 UTC-4下午4:17:59，guoy...@gmail.com写道：

Hi all,

I tried to install trust 3.0 and 3.01, the same error occurred. Details list as below:

Processing dependencies for trust==3.0

Searching for regex

Reading https://pypi.python.org/simple/regex/

Download error on https://pypi.python.org/simple/regex/: [SSL: TLSV1_ALERT_PROTOCOL_VERSION] tlsv1 alert protocol version (_ssl.c:661) -- Some packages may not be found!

Couldn't find index page for 'regex' (maybe misspelled?)

Scanning index of all packages (this may take a while)

Reading https://pypi.python.org/simple/

Download error on https://pypi.python.org/simple/: [SSL: TLSV1_ALERT_PROTOCOL_VERSION] tlsv1 alert protocol version (_ssl.c:661) -- Some packages may not be found!

No local packages or working download links found for regex

error: Could not find suitable distribution for Requirement.parse('regex')

Can you help to figure out how to solve this?

Thanks.

Best,

Yicheng Guo

--
You received this message because you are subscribed to the Google Groups "TRUST for T cell receptor hypervariable region assembly" group.

To unsubscribe from this group and stop receiving emails from it, send an email to trusttcr+u...@googlegroups.com.

To post to this group, send email to trus...@googlegroups.com.

[Bo Li]

That never happened to me -- Jian, could you help with this?

Thanks,

Bo

To unsubscribe from this group and stop receiving emails from it, send an email to trusttcr+unsubscribe@googlegroups.com.

To post to this group, send email to trus...@googlegroups.com.

To view this discussion on the web visit https://groups.google.com/d/msgid/trusttcr/2bd85c47-8f3d-457e-aaaf-792bd7943297%40googlegroups.com.

[guoy...@gmail.com]

Finally, it because I install Trust on our High-performance-computer, there are too many versions of Python, it has a very complicated software switch system, that's why made this unpredictable error. So I try to run with "python2.7.14 ./trust", it works now. Stupid HPC!!!! 

在 2018年4月25日星期三 UTC-4下午3:23:41，Bo Li写道：