TCGA TRUST data

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asaf...@gmail.com

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Jul 15, 2018, 10:18:44 PM7/15/18
to TRUST for T cell receptor hypervariable region assembly
Hi Bo Li,

In your original TCR from RNA-seq paper, which preceded TRUST, you had supplementary data that included Distinct deidentified CDR3 sequence calls generated in this study in fasta format. Do you have a similar data file after running TRUST on TCGA? 

Thank you, 
Asaf

Bo Li

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Jul 18, 2018, 10:10:09 AM7/18/18
to asaf...@gmail.com, TRUST for T cell receptor hypervariable region assembly
Hi Asaf,

Thank you for your interest in our work. We have such a dataset and are currently analyzing it for more insights on tumor immunology. The release of this dataset will be dependent on the progress of our current research.

Best,
Bo

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