Assembling a 127Gb .fastq file (500M reads)

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justin

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Aug 10, 2024, 8:15:30 PM8/10/24
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Hi all, I'm trying to perform a de novo transcriptomic assembly, my R1 and R2 paired-end read files are 127Gb each, 500M reads each. I tried doing the assembly on UseGalacxy but it did not work due to "too much data for galaxy server backend". I am now attempting this on my university's high performance computing clusters. It is not working so far, I am still trying to make it work. Has anyone tried this? Any tips? Thank you.  
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