Trinity run failed
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Fangqin Zeng
Apr 15, 2016, 3:24:47 PM4/15/16
to trinityrnaseq-users
-conversion of 30575 from FQ to FA format succeeded.
-conversion of 30575 from FQ to FA format succeeded.
Friday, April 15, 2016: 14:18:15 CMD: touch left.fa.ok right.fa.ok
-------------------------------------------
----------- Jellyfish --------------------
-- (building a k-mer catalog from reads) --
-------------------------------------------
Run with following coutputs:
* Running CMD: /aafc-aac/home/users-data/mpp/trinityrnaseq-2.1.1/trinity-plugins/jellyfish/bin/jellyfish count -t 4 -m 25 -s 304805520 both.fa
/aafc-aac/home/users-data/mpp/trinityrnaseq-2.1.1/trinity-plugins/jellyfish/bin/jellyfish: /opt/hds/Base/libstdc++.so.6: version `GLIBCXX_3.4.11' not found (required by /aafc-aac/home/users-data/mpp/trinityrnaseq-2.1.1/trinity-plugins/jellyfish/bin/jellyfish)
Trinity run failed. Must investigate error above.
-conversion of 30575 from FQ to FA format succeeded.
Friday, April 15, 2016: 14:18:15 CMD: touch left.fa.ok right.fa.ok
-------------------------------------------
----------- Jellyfish --------------------
-- (building a k-mer catalog from reads) --
-------------------------------------------
Run with following coutputs:
* Running CMD: /aafc-aac/home/users-data/mpp/trinityrnaseq-2.1.1/trinity-plugins/jellyfish/bin/jellyfish count -t 4 -m 25 -s 304805520 both.fa
/aafc-aac/home/users-data/mpp/trinityrnaseq-2.1.1/trinity-plugins/jellyfish/bin/jellyfish: /opt/hds/Base/libstdc++.so.6: version `GLIBCXX_3.4.11' not found (required by /aafc-aac/home/users-data/mpp/trinityrnaseq-2.1.1/trinity-plugins/jellyfish/bin/jellyfish)
Trinity run failed. Must investigate error above.
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