Announcement: CTAT-LR-fusion v0.12.0 Release
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Brian Haas
Jan 2, 2024, 12:51:51 PMJan 2
to Trinity_CTAT_users
Greetings and Happy New Year!
We have a new release available for CTAT-LR-fusion for fusion detection with long isoform read sequences:
https://github.com/TrinityCTAT/CTAT-LR-fusion/releases/tag/ctat-LR-fusion-v0.12.0
https://github.com/TrinityCTAT/CTAT-LR-fusion/releases/tag/ctat-LR-fusion-v0.12.0
release notes:
- igv html working with long and short reads together
- results sorted by descending countws of supporting reads
- in combined long/short mode, retain any fusion calls with illumina reads that meet the min read requirements regardless of dominant isoform fraction results
- added option --chim_candidates_only to just get the initial list of chimeric candidate
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