DIFFCALC Xmanager error

[Meghan Robinson]

I’m running into a problem when I run DIFFCALC.  My goal is to use iRESTORE to see if we can clean up some data from one of our imaging center users (I think it has a vibration artifact? Not sure, still pretty new to DTI) so I’ve been running a few datasets that were acquired with different protocols and they all seem to run into issues in DIFFCALC. 

 

As far as I can tell, I’m following the TORTOISE documentation I got from the bootcamp in March.  But, when I get to DIFFCALC and try to load a .list file, it tells me that it’s corrupt. If I load tensors and then load the .list from that, it works (in that, I can do things like export to AFNI or TRACKVIS), but I don’t think the iRESTORE process is actually running. 

 

My error message (in the terminal window where I’ve run ./calcvm) is something like:

 

Please open list file Ramiro_DMC_N1_DT_L0.list and click restore

% XMANAGER: Caught unexpected error from client application. Message follows...

% Variable is undefined: RAW_FILENAME (INPUTSHARE).

% Execution halted at:  MASK_BET_NORAW3    46 

%                       CALL_MASK          12 

%                       DDTI_EVENT        500 

%                       XMANAGER_EVLOOP_STANDARD  478 

%                       XMANAGER          710 

%                       DDTI              916 

%                       DIFFCALC          111 

%                       IDLRTMAIN         170 

%                       $MAIN$          

 

I keep trying different things, and I get messages similar to this, but exactly, depending on if I’m trying to mask or process tensors, etc, etc.  Any thoughts? 

 

Thanks in advance for your help!!

-Meghan