Batch processing

[Erik Chang]

Dear All,

I am trying to batch-process diffprep by following the description in:
https://science.nichd.nih.gov/confluence/display/nihpd/3.1.3+from+Command+Line

Although I can create the *.xml, and *.list files by custom shell script, it seems that the files described in the *.path file are the results of importing data from diffprep_gui (*_slices/*.raw), and I am not sure how to do this from command line. Is there a way to import data from command line? Or this is a step only possible from the gui?

Thanks,

Erik

[M. Okan Irfanoglu]

Hello,

Unfortunately, currently we do not have a tool to batch import data and this has to be done through the GUI.

Once the data is imported, .list and .path files sohuld already be there and with the XML files you create with your scripts you can batch DIFFPREP data.

apologies..

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[Erik Chang]

Thanks for the information.

Erik

--

Erik Chang, PhD
Action and Cognition Laboratory
Institute of Cognitive Neuroscience
National Central University

http://acl.ncu.edu.tw/neuroimaging/wiki/index.php/Erik_Chang

Rm601, Science Building 5, No.300, Jhongda Rd.,

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[Erik Chang]

Hi Dr. Irfanoglu,

Can diffcalc be batch processed?

Thanks,

Erik