how to import a tree which is not in the compact format

[José Ribeiro]

Hello everyone, would you mind helping me with this issue. I want to calculate SPR differences among some trees. Some of them will be estimated in TNT but others will be  imported into TNT in the nexus format or whatever other. Using the command short, one can just import trees in the compact format. How about the other formats? Is it possible with any command? Thank you in advance. 

[Miguel Moreno-Azanza]

You can use an * to save in parenthetical format

Tsave* filename.tre; save; tsave/;

Should do the trick. 

On Sun, 25 Oct 2020, 22:38 José Ribeiro, <jozeca...@gmail.com> wrote:

Hello everyone, would you mind helping me with this issue. I want to calculate SPR differences among some trees. Some of them will be estimated in TNT but others will be  imported into TNT in the nexus format or whatever other. Using the command short, one can just import trees in the compact format. How about the other formats? Is it possible with any command? Thank you in advance. 

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[EAscarrunz]

The most recent versions of TNT can read trees in the Newick format using this command:

```

proc [ <filename>;

```

Also, note that you must have a matrix in memory with all the species names that you are going to use before reading trees in any format.

[José Ribeiro]

Thank you so much.