Just an update. To anyone familiar with Brackets this won't be surprising.
It was not detailed that Theseus uses ConsoleAgent which requires Developer Tools to be active to log console messages from project code. After discovering tis, I found that it was not working so I checked my Chrome settings and noticed that I had cookies blocked as I normally do; I unblocked cookies, and then I was able to see my codes log messages in another Chrome window with Developer Tools in it. This is a very distracting 'workflow'. I had been hoping that my console messages would have appeared IN Brackets alongside Theseus's Log - its very distracting having to write code, save code, view code in browser, click, check log in browser, return to code in Brackets etc even with two monitors. It should just be save, auto-run, see my console messages alongside output in Theseus Log. It would keeps me more code focused anyhow.
Can I make a feature request here that project code console statements are output into the Theseus Log. Anybody else have any feelings about this?