Ok that's a big mess.
1. If you want to save/reuse sheets of comb they built and as you said, have brood in them, here's what you can do.
Take an unused top bar (I think you're calling it a log), strap a big ponytail clip to the underside.
Cut a sheet of misdirected comb and clip it to the new top bar, wahlah.
Do that to each sheet of comb you want to relocate.
2. Now that you have sheets of comb heading the right direction, bees will continue building them straight down.
Go in every other day and push them into a better direction if you see them going cattywampus.
3. The bars that you cut the sheets of comb from are left with wax remnants. Great, that will encourage them to start drawing comb on those bars.
Go in every other day and press them into proper alignment.
3. Did you know I have a YouTube Channel? @KeeperOfTheWildBees
You've got a common predicament many topbar keepers run into and others could benefit from learning a solution.
Id be willing to come over and help you sort this out and
Id like to film it for my channel.
If youd like to...give me a call
925-858-9760 Robin The Beekeeper