tellurium-discuss

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Herbert M Sauro

Jan 4

Moving conversations to GitHub

I am going to close this group down in a month because most users now post questions etc about

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Moving conversations to GitHub

I am going to close this group down in a month because most users now post questions etc about

Jan 4

Lucia Nasti, Herbert M Sauro2

6/3/21

libroadrunner error with python 3.8

It turns out the documentation is wrong, it looks like the method was changed but the docs were not

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libroadrunner error with python 3.8

It turns out the documentation is wrong, it looks like the method was changed but the docs were not

6/3/21

Veronica Porubsky

5/10/21

Invitation to a Network Modeling Summer School and Symposium, July 19-23, 2021

2021 Network Modeling Summer School and Symposium July 19-23, 2021 You are invited to attend a week-

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Invitation to a Network Modeling Summer School and Symposium, July 19-23, 2021

2021 Network Modeling Summer School and Symposium July 19-23, 2021 You are invited to attend a week-

5/10/21

3/26/21

Re: [Tellurium discuss] Digest for tellurium-discuss@googlegroups.com - 5 updates in 1 topic

Thank you very much, Lucian, That's what I was looking for. Best On 26. Mar 2021, at 10:35,

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Re: [Tellurium discuss] Digest for tellurium-discuss@googlegroups.com - 5 updates in 1 topic

Thank you very much, Lucian, That's what I was looking for. Best On 26. Mar 2021, at 10:35,

3/26/21

Jalil Nourisa, … Herbert M Sauro5

3/25/21

How to extend a SBML model

See Lucian reply, I'd forgotten we have a new api to manipulate a model directly. Herbert On Thu,

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How to extend a SBML model

See Lucian reply, I'd forgotten we have a new api to manipulate a model directly. Herbert On Thu,

3/25/21

Giovanni Pugliese Carratelli, … Lucian Smith6

10/30/20

Question about how and if parallelism is implemented

The easiest way to accomplish this is to tell it to only collect two points (ie the start point and

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Question about how and if parallelism is implemented

The easiest way to accomplish this is to tell it to only collect two points (ie the start point and

10/30/20

10/26/20

Hello, my name is Beatriz Please, is it possible to load external data within a tellurium model? For

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Hello, my name is Beatriz Please, is it possible to load external data within a tellurium model? For

10/26/20

9/3/20

Online Cell Modeling Seminar -- with Luis Serrano and Markus Covert -- this Tuesday September 8 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

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Online Cell Modeling Seminar -- with Luis Serrano and Markus Covert -- this Tuesday September 8 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

9/3/20

8/11/20

Reminder: Today is Online Cell Modeling Seminar -- with Matthias Koenig and Vassily Hatzimanikatis this Tuesday August 11 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

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Reminder: Today is Online Cell Modeling Seminar -- with Matthias Koenig and Vassily Hatzimanikatis this Tuesday August 11 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

8/11/20

8/10/20

Tomorrow is Online Cell Modeling Seminar -- with Matthias Koenig and Vassily Hatzimanikatis this Tuesday August 11 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Tomorrow is Online Cell Modeling Seminar -- with Matthias Koenig and Vassily Hatzimanikatis this Tuesday August 11 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

8/10/20

8/7/20

Mac version ready for testing

Hello, everyone! I have now compiled all of tellurium's dependencies for the mac, and uploaded

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Mac version ready for testing

Hello, everyone! I have now compiled all of tellurium's dependencies for the mac, and uploaded

8/7/20

7/13/20

Reminder: Tomorrow is Online Cell Modeling Seminar -- with Paola Vera-Licona and Dirk Fey this Tuesday July 14 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Reminder: Tomorrow is Online Cell Modeling Seminar -- with Paola Vera-Licona and Dirk Fey this Tuesday July 14 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

7/13/20

7/9/20

Online Cell Modeling Seminar -- with Paola Vera-Licona and Dirk Fey this Tuesday July 14 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Online Cell Modeling Seminar -- with Paola Vera-Licona and Dirk Fey this Tuesday July 14 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

7/9/20

Luke Wheeler, … Herbert M Sauro7

6/18/20

Concentration gradient

Thanks! No publications yet on this specific project, but I have been using Tellurium in my work to

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Concentration gradient

Thanks! No publications yet on this specific project, but I have been using Tellurium in my work to

6/18/20

6/8/20

Reminder: Tomorrow is Online Cell Modeling Seminar -- with William W. Lytton this Tuesday June 9 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Reminder: Tomorrow is Online Cell Modeling Seminar -- with William W. Lytton this Tuesday June 9 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

6/8/20

6/4/20

Online Cell Modeling Seminar -- with William W. Lytton this Tuesday June 9 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Online Cell Modeling Seminar -- with William W. Lytton this Tuesday June 9 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

6/4/20

5/11/20

Reminder: Tomorrow is Online Cell Modeling Seminar -- with Luis Serrano and Jonathan Karr this Tuesday May 12 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Reminder: Tomorrow is Online Cell Modeling Seminar -- with Luis Serrano and Jonathan Karr this Tuesday May 12 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

5/11/20

5/8/20

Online Cell Modeling Seminar -- with Luis Serrano and Jonathan Karr this Tuesday May 12 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Online Cell Modeling Seminar -- with Luis Serrano and Jonathan Karr this Tuesday May 12 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

5/8/20

Jorin Diemer, Herbert M Sauro2

5/6/20

Question regarding getCurrentSBML method

Thanks for the report, we'll look into this. This may be a bug that is already on our list, I

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Question regarding getCurrentSBML method

Thanks for the report, we'll look into this. This may be a bug that is already on our list, I

5/6/20

willigott, Herbert M Sauro4

4/28/20

How to use a spline fit as driving function?

I put together this simple python script that can be used to generate the spline code for an antimony

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How to use a spline fit as driving function?

I put together this simple python script that can be used to generate the spline code for an antimony

4/28/20

Lucia Nasti, … Herbert M Sauro4

4/22/20

libroadrunner and GPU

Thank you very much for your help! Il giorno martedì 21 aprile 2020 11:22:28 UTC+2, Lucia Nasti ha

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libroadrunner and GPU

Thank you very much for your help! Il giorno martedì 21 aprile 2020 11:22:28 UTC+2, Lucia Nasti ha

4/22/20

Tacio Camba Espí, Matthias König3

4/17/20

libroadRunner C API dense output.

Thank you Matthias for your clarifying answer. Best regards, Tacio El viernes, 17 de abril de 2020,

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libroadRunner C API dense output.

Thank you Matthias for your clarifying answer. Best regards, Tacio El viernes, 17 de abril de 2020,

4/17/20

4/13/20

Reminder: Online Cell Modeling Seminar Tomorrow -- Tuesday April 14 @ 12:00pm EDT with Eberhard O. Voit and Ines Thiele

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Reminder: Online Cell Modeling Seminar Tomorrow -- Tuesday April 14 @ 12:00pm EDT with Eberhard O. Voit and Ines Thiele

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

4/13/20

4/8/20

Online Cell Modeling Seminar -- with Eberhard O. Voit and Ines Thiele this Tuesday April 14 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Online Cell Modeling Seminar -- with Eberhard O. Voit and Ines Thiele this Tuesday April 14 @ 12:00pm EDT

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

4/8/20

3/8/20

Reminder: Tomorrow Monday (not Tuesday) March 9 @ 12:00pm EDT -- Online Cell Modeling Seminar with Patrick Boyle and Miguel A. Aon

REMINDER: The next seminar will be this Monday (rather than Tuesday) March 9. Due to daylight savings

unread,

Reminder: Tomorrow Monday (not Tuesday) March 9 @ 12:00pm EDT -- Online Cell Modeling Seminar with Patrick Boyle and Miguel A. Aon

REMINDER: The next seminar will be this Monday (rather than Tuesday) March 9. Due to daylight savings

3/8/20

3/4/20

This Monday (not Tuesday) March 9 @ 12:00pm EDT -- Online Cell Modeling Seminar with Patrick Boyle and Miguel A. Aon

REMINDER: The next seminar will be this Monday (rather than Tuesday) March 9. Due to daylight savings

unread,

This Monday (not Tuesday) March 9 @ 12:00pm EDT -- Online Cell Modeling Seminar with Patrick Boyle and Miguel A. Aon

REMINDER: The next seminar will be this Monday (rather than Tuesday) March 9. Due to daylight savings

3/4/20

Yuri Gardinazzi

3/2/20

RoadRunner C++ API setValue()

Hi, I'm using libRoadRunner with the C++ implementation and I cannot change it. I've

unread,

RoadRunner C++ API setValue()

Hi, I'm using libRoadRunner with the C++ implementation and I cannot change it. I've

3/2/20

2/10/20

Reminder: Tomorrow is Online Cell Modeling Seminar -- with Melissa Kinney and David Arnosti this Tuesday February 11 @ 12:00pm EST

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Reminder: Tomorrow is Online Cell Modeling Seminar -- with Melissa Kinney and David Arnosti this Tuesday February 11 @ 12:00pm EST

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

2/10/20

2/6/20

Online Cell Modeling Seminar -- with Melissa Kinney and David Arnosti this Tuesday February 11 @ 12:00pm EST

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

unread,

Online Cell Modeling Seminar -- with Melissa Kinney and David Arnosti this Tuesday February 11 @ 12:00pm EST

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our

2/6/20

1/13/20

Reminder: Tomorrow January 14 @ 12:00pm EST is the First Online Cell Modeling Seminar -- with Uri Alon and Herbert Sauro

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our first

unread,

Reminder: Tomorrow January 14 @ 12:00pm EST is the First Online Cell Modeling Seminar -- with Uri Alon and Herbert Sauro

The Center for Reproducible Biomedical Modeling would like to invite you to participate in our first

1/13/20

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