Problem with TCS

[ysch...@uni-koeln.de]

Dear T-Coffee team,

I have previously used TCS on the web server to evaluate and filter
alignments. However, when I tried it yesterday, it kept telling me
that it could not complete. I tried multiple of my own alignments (see
attachment for an example) as well as a very simple alignment
(https://tcoffee.crg.eu/apps/tcoffee/result?rid=35811eef) with the
short sequences
> seq1
ATCG
> seq2
ATAG
> seq3
AT-G
> seq4
ACCG

Is there a general problem with t-coffee right now or am I doing
something wrong?
Thanks in advance for your help!

With best regards
Yannick Schäfer
University of Cologne
Wiehe group

[Cedric Notredame]

Dear Yannick

The back end cluster was recently upgraded and I am not entirely sure everything is back to normal. 

I am CCintbis email to Jose Espinosa with who I maintain the website. We will hopefully manage to troubleshoot this issue. 

Best

Cedric 

-- 

Dr Cedric Notredame, PhD
ORCID - https://orcid.org/0000-0003-1461-0988

On 1 Aug 2024, at 08:57, ysch...@uni-koeln.de wrote:

Dear T-Coffee team,

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[Jose Espinosa-Carrasco]

Thanks for reporting Yannick!

The issue is fixed now, enjoy! :)

j

[ysch...@uni-koeln.de]

Dear T-Coffee team,

I am not sure whether you changed something or I changed something in
my files, but TCS works for me again.
I apologize for any inconvenience.

With best regards
Yannick Schäfer
University of Cologne
Wiehe group