TASSEL-GBS enzyme request

[Matthew Haas]

We used the BtgI-TaqI enzyme combination for our GBS project. Is there any chance that we could get support for these enzymes added to the TASSEL-GBS pipeline?

Thank you.

Kind regards,

Matthew Haas

[Lynn Carol Johnson]

HI Matthew –

 

With the current release of TASSEL 5 you can easily add your own enzymes. 

1.  Pull the tassel-5 source code.
2. Edit file lib/enzymes.ini :  add your new enzymes
3. Compile and run

 

The code will pull in the new enzymes you’ve defined in the lib/enzymes.ini file.

 

Lynn

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[Matthew Haas]

Thanks, Lynn! I appreciate it.

Kind regards,

Matthew

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Matthew Haas, PhD

Research associate

Department of Agronomy and Plant Genetics

University of Minnesota

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