NOSE question

[Alex Balboa]

Hello,

I noted that on the webpage:

http://molmod.github.io/tamkin/tutorial/install.html

The following software must be installed for TAMkin:

• Python >=2.7,<3.0: http://www.python.org/doc/
• Numpy >=1.0: http://numpy.scipy.org/
• Scipy >=0.17.1: http://www.scipy.org/
• MatPlotLib >=1.1: http://matplotlib.org/
• MolMod >=1.3.1: https://github.com/molmod/molmod
• Nosetests >=0.11: http://somethingaboutorange.com/mrl/projects/nose/0.11.2/

if you go to the NOSE website (old link broken?):

http://nose.readthedocs.io/en/latest/

Note to Users

Nose has been in maintenance mode for the past several years and will likely cease without a new person/team to take over maintainership. New projects should consider using Nose2, py.test, or just plain unittest/unittest2.

Basically, will TAMkin use Nose2, py.test, or just plain unittest/unittest2 in the very near future?

thanks,

alex

[Toon Verstraelen]

Hi Alex,

Thanks for bringing this to our attention. I still have to look into the
details and discuss this with a few colleagues. Nose2 is the most likely
choice.

Best Regards,

Toon

On 09/12/2017 06:06 PM, Alex Balboa wrote:
> Hello,
> I noted that on the webpage:
> http://molmod.github.io/tamkin/tutorial/install.html
>
> The following software must be installed for TAMkin:
>

> * Python >=2.7,<3.0: http://www.python.org/doc/
> * Numpy >=1.0: http://numpy.scipy.org/
> * Scipy >=0.17.1: http://www.scipy.org/
> * MatPlotLib >=1.1: http://matplotlib.org/
> * MolMod >=1.3.1: https://github.com/molmod/molmod
> * Nosetests >=0.11:

> http://somethingaboutorange.com/mrl/projects/nose/0.11.2/
>
> if you go to the NOSE website (old link broken?):
> http://nose.readthedocs.io/en/latest/
>
>

> Note to Users<http://nose.readthedocs.io/en/latest/#note-to-users>

>
> Nose has been in maintenance mode for the past several years and will
> likely cease without a new person/team to take over maintainership. New
> projects should consider using Nose2

> <https://github.com/nose-devs/nose2>, py.test <http://pytest.org/>, or

> just plain unittest/unittest2.
>
>
> Basically, will TAMkin use Nose2, py.test, or just plain
> unittest/unittest2 in the very near future?
>
>
> thanks,
>
> alex
>

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[Alex Balboa]

Toon,

thanks for the additional information.  Regarding the dependencies of TAMkin:

The following software must be installed for TAMkin:

• Python >=2.7,<3.0: http://www.python.org/doc/

• Numpy >=1.0: http://numpy.scipy.org/
• Scipy >=0.17.1: http://www.scipy.org/
• MatPlotLib >=1.1: http://matplotlib.org/

• MolMod >=1.3.1: https://github.com/molmod/molmod/
• Nosetests >=0.11: http://nose.readthedocs.io/en/latest/

these are the current releases

https://www.python.org/

https://www.python.org/ftp/python/3.6.2/python-3.6.2.exe

https://pypi.python.org/pypi/numpy

https://pypi.python.org/packages/b3/a5/e969e91993badec3b440c4fd144ddaff5cfd4b06f1d29fd75e53f8f3a9a7/numpy-1.13.1-cp27-cp27m-manylinux1_x86_64.whl#md5=7906018278f3471a9a166a3975523ddd

https://pypi.python.org/packages/5f/d2/9fa0201944933afd6d059f1e32aa6bdb203b23ab62fc823d3adf36295b9a/numpy-1.13.1-cp27-cp27mu-manylinux1_x86_64.whl#md5=de272621d41b7856e1580307be9d1fba

https://pypi.python.org/pypi/scipy

https://pypi.python.org/packages/74/18/2bd4719bcd359121a4ea56b833b1fc2cc2d3ddea8cb2699bbebae72bda18/scipy-0.19.1-cp27-cp27m-manylinux1_x86_64.whl#md5=f513eb4ea2086de169a502df7efb91c7

https://pypi.python.org/packages/8e/43/a7b400e7ea07220fb419f0669ff17f5ef71653cf32827315224bc9dda9d4/scipy-0.19.1-cp27-cp27mu-manylinux1_x86_64.whl#md5=afbf8ffb4a4fe7c18e34cb8a313c18ee

https://pypi.python.org/pypi/matplotlib/#downloads

https://pypi.python.org/packages/e5/f5/bdc0cf3cd9b1e41a8e39ba754659f97218fa01d7cb59a08910ba9b14cfa4/matplotlib-2.1.0rc1-cp36-cp36m-manylinux1_x86_64.whl#md5=c356d2756e5211d8000fa64d9e604a51

https://pypi.python.org/pypi/molmod

https://pypi.python.org/packages/0b/85/bb75ec4376a612f3e5300712c5e1abab63894ec1bbf7be249a42a90b2c66/molmod-1.4.3.tar.gz#md5=3e85f36af245ffa59497c3c1389f2c56

I assume the above packages would be all compatible to build TAMkin

Thanks,

alex