Sarah
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to systemsbiology-visualizations, systemsbiology...@systemsbiology.org
These are the notes I grabbed while we talked. Please add anything I
may have missed or that you've since thought of.
Requirements & thoughts:
- Low level API needs to be semantically independent (not dealing in
genes & proteins)
- Initial format of any graph data can be transformed into the
DataTable(s) that represent a network
- Client - server communication will only occur at specific points
(avoid chatter) such as:
1) Loading network from URI
2) Persisting data
3) Data transformations
Rough ideas:
1) Low level events may include: selected, added, deleted, modified(?)
2) Data tables: Network, Layout, Attribute (node/edge/network ??)
3) Visualization methods may include: draw, add(node/edge),
delete(node/edge), select(node/edge)
Next meeting: Sept. 19th