Publications Citing SBOL

[Cesar A. Rodriguez]

Ladies and Gents,

I want to congratulate Joanna, Doug, Tim, Jay, and Nathan for the DeviceEditor publication.  Thanks for citing SBOL!

I've added a new section to the publications page on the SBOL web site that lists publications that cite SBOL:

https://sites.google.com/a/sbolstandard.org/sbol/publications?pli=1

I'm aware of a recent submission to PNAS from the Voigt Lab that also cites SBOL.  Its a good moment to ask if you are aware of other publications that cite SBOL?

If so, please send them my way and I'll add them to the web page.

Preemptive THANKS for your help!

Cesar

[UMESH P]

Ceasr,

This is another one, 

Matthew W. Lux, Brian W. Bramlett, David A. Ball, Jean Peccoud(2011) Genetic design automation: engineering fantasy or scientific renewal? Trends in Biotechnology, 30(2), 120-126. doi:10.1016/j.tibtech.2011.09.001

--

Umesh P.
Lecturer
Department of Computational Biology and Bioinformatics

University of Kerala, Thiruvananthapuram, Keralam, India - 695581

Web | Keralabs | Facebook  |||  It is not our generosity to protect Nature, but is our duty |||

[Chris J. Myers]

We mentioned SBOL in our IEEE Design and Test paper.  

Chris

[Cesar A. Rodriguez]

Doug, Chris, and Umesh,

Thanks for the heads up!

Have a great weekend!

Cesar

On Apr 5, 2012, at 6:47 PM, Douglas Densmore wrote:

> We mention SBOL (and have pictures of SBOL visual in):
> http://www.ncbi.nlm.nih.gov/pubmed/21559524
>
> Doug

[Cesar A. Rodriguez]

Mike,

The attached figure triggers goosebumps and a silly grin.

;-D

HUGE CONGRATS to Karsten, Dehua, and Chris!

Cesar

[Cesar A. Rodriguez]

Nathan,

Full compliance would have been icing on the cake. I still like the cake.

:-D

There is a lot more work needed to make SBOL Visual more descriptive and easier to use. I'm excited to see what direction Aaron takes the project.

Cesar

On Apr 18, 2012, at 5:13 PM, Nathan Hillson wrote:

> They are not using SBOL Visual icons, but they are reasonable
> approximations. Slightly disappointing.
>
> Nathan

>> On Apr 18, 2012, at 12:38 PM, Michal Galdzicki wrote:
>>
>> http://www.pnas.org/content/early/2012/04/13/1120788109.abstract
>>
>> Karsten Temme, Dehua Zhaob,Christopher A. Voigt
>> Refactoring the nitrogen fixation gene cluster from Klebsiella oxytoca
>> 10.1073/pnas.1120788109
>>
>> paper cites SBOL, but mostly cool because they ... rebuilt a gene cluster
>> from the bottom up using only synthetic, well-characterized parts."
>>
>> parts are deposited in: https://registry.synberc.org although I dont think
>> this is public, so its odd that they put in the paper: Can't get a username:
>> https://registry.synberc.org/registration
>> Some sequence is in GenBank but I didnt look if that is everything.
>>
>> Anyone know who is in charge of this SynBERC version of GD-ICE?
>>
>> mike
>>
>>
>>