lmp_stable is the executable. It works fine. However I can not find the python tools like logplot.py, log2txt.py etc.
So in order to use them I copied logplot.py and pizza folder from my local machine and put it in the remote machine. Then I tried python /logplot.py
This is a question you have to ask the person packaging the LAMMPS binaries you are using. This is not done by the LAMMPS developers. We only mention the repository as a courtesy and convenience. As with other packaging of binaries, what files are included and how they are installed is a choice of the individual people managing the packaging.
The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
Absorption (ABS) and circular dichroism (CD) spectra were recorded for 3 concentrations (2.3, 19 and ca. 75 μM) of 4-isobutyl homologs. Monomer spectra were the same as those for 4-n-propyl-5-ethyl farnesyl bacteriochlorophyll c. Pure polymer spectra were obtained by subtracting the 2.3-μM spectra appropriately scaled from the ca. 75-μM spectra. The polymer showed an ABS peak at 742 nm and a CD trough at ca. 742 nm. These properties are in harmony with the aggregate model proposed by Smith KM, Kehrs LA and Fajer J (1983, J Am Chem Soc 105: 1387-1389). A log-logplot of absorbance at 742 nm vs. monomer concentration could be fitted by a straight line of slope 1.6.