Is SAF format 0 based or 1 based?

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Jan 3, 2021, 9:54:44 PM1/3/21

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Hi,

Is SAF format 0 based or 1 based? It is not documented in the usr guide. I am trying to summarize reads based on regions in bed format.

Thank you in advance.

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Jan 3, 2021, 10:08:11 PM1/3/21

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The coordinates in the SAF format are 1-based coordinates.

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