STRUCTURE not creating result files when running in STRAUTO

[Laura Bertola]

Hi all,

I'm trying to run STRAUTO (on a Mac, Python version 2.7) but somehow it quits when running STRUCTURE. It successfully creates all necessary files (mainparams, extraparams) from input.py, and it has the runstructure and structureCommands files in the same folder. When typing ./runstructure it starts creating the necessary folders and subfolders, but then it doesn't run and gives a zip error ("Nothing to do!") because it is missing the actual output files (please see the detailed output below). Does anybody know what is going on here?

Cheers, Laura

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cp: results_f/k*/*_f: No such file or directory

Your structure run has finished.

zip warning: name not matched: harvester_input/*



zip error: Nothing to do! (herectusu_Harvester_Upload.zip)

mv: rename herectusu_Harvester_Upload.zip to harvester/herectusu_Harvester_Upload.zip: No such file or directory

[Vikram Chhatre]

Laura,

Can you directly email me a zip file containing your data file and StrAuto scripts (runstructure, mainparams, extraparams and if you are using Parallelization, then structureCommands)?

V

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