How to segment the target image with the statismo shape model?

[13005...@qq.com]

I want to use the statismo generated shape model to segment inner ear in the MRI Dicom images.

Now I  had manually segmented the structure of the inner ear on the head MRI images and used it as a training dataset. I used 10 sets of such  three-dimensional   datasets for training.The following figure is the three-dimensional volume data of the inner ear as the training dataset. 

I  used the model fitting  of statismo to achieve alignment and registration, and then I used the following instructions to generate the inner ear statistical shape model, .h5 file,

statismo-build-shape-model.exe  -p GPA -l inner_data/datalist_inner.txt -o inner_data/pcamodel_inner.h5

Then I don't know how to use this file to segment the inner ear structure of new test samples?

I would like to know  is there a good tool  to achieve  the segmentation with the statistical shape model? Or Is there any example code?

Any help would be much appreciate.

Zhu Shanshan

[Ibrahim A]

Hi,

I am interested in the same thing. Have you solved this issue somehow?

regards!

Ibraheem

[zhaozh...@gmail.com]

Have you solved the problem? Can i cantact with you in another way?

Looking forward to your reply!

在 2016年12月23日星期五 UTC+8下午4:29:26，Zhu Shanshan写道：