Re: Labview Biomedical Toolkit Free Download
Sacha Weakland
I am using the Biomedical toolkit with labVIEW 2014. I want to generalize the given example "ECG Feature Extractor.vi" to be eligible to extract any ECG signal's features. Can someone help me understand the meaning of the blocks in a red circle number 1 of the attached picture? How did he decide on these values.
It sounds like it should be your call. I would definitely test it out the VI and see if it creates results that are intended. If not, then change the values to whatever you like. From what the constants look like, locking the parameters in to the default case will probably create the more general case signal.
All in all, just test it out and see if it gives you the results you are looking for. Constants are easy to modify quickly. The detailed help for every subVI you use should give enough information about the inputs to modify in an educated manner. You could even change the constants to controls to make it easier to change on the fly.
The biomedical toolkit requires the Advanced Signal Processing Toolkit to be installed on your machine. You should be able to use this toolkit if you have an academic site license for LabVIEW or if you have the LabVIEW Full Development System installed. You can download the Advanced Signal Processing Toolkit from the page linked below:
An arrhythmia is a disease in which the heart may beat too fast, too early, too slow or irregular and few may give rise to death or irreparable danger. Atrial fibrillation is one of the most common types of arrhythmia; in this case the heart may race at more than 400 beats per minute. The complications due to atrial fibrillation may lead to cardiomyopathy, haemodynamic instability, strokes or even cardiac failure. The main purpose of this study is to design and develop a simple tool box for the early detection of the atrial fibrillation using the biomedical toolkit of the LabVIEW. As ECG is the conventional method of its detection, but suffers several disadvantages regarding accuracy in diagnosis, but when these vital signals are subjected to the real time analysis on a specially designed LabVIEW based toolbox, the diagnosis accuracy and the correct prediction increases several times. This study will prove to be a great panacea for the cardiac affected patients when the fatal threat to the heart, arrhythmia will be detected at a very early stages.
Across the world there are continues efforts made for developing different approach and algorithms for the feature extraction of ECG in the minimum time [3], but yet the optimized algorithm is yet to be developed. In this study the author proposes a simple biomedical tool box for the early detection of arrhythmia using a bio medical toolkit of the LabVIEW 8.5. So the basic objective of this research work is to design and develop a much accurate and a faster software algorithm that would help to replace the existing electrocardiograms and would facilitate the cardiac experts to detect and record the basic arrhythmia symptoms simultaneously as early as possible. The algorithm enables the monitoring and recording of heart pulse rate, QRS width, PR interval, RR interval and QT interval, etc. for the early detection of arrhythmia in minimum time.
The complete process and flow of the electrical conduction system of the heart is shown by the Figure 1. As we all know that the heart beats of a normal human being starts with a small current that is in the millivolt range. And this small electrical pulse very quickly spreads throughout the heart and makes a complete heartbeat [4].
All the three components of the electrocardiogram are shown in the Figure 2 in detail, when the blood circulates towards the heart and proceeds in the atrium, known as atrial depolarization, due to which the P wave is formed [7]. After that, the blood moves for ventricular depolarization which causes the formation of QRS complex. And finally, the circulation of the blood undergoes ventricular repolarization in the ventricles causing the formation of the T wave. All the time components of different segments of ECG are clearly shown in the Figure 2. The most important parameter of the ECG is the heart rate which tells us about the number of times our heart is pumping the blood in one minute in the body.
The micro observation of the ECG signal gives us the information that if it is a normal sinus rhythm then we will get the pulse rate somewhere between 58-108 bpm. In this sinus rhythm, presence of any disturbance or any abnormality will be classified as cardiac arrhythmia [8]. Therefore anything above 108 bpm will be known as tachycardia and slower than 58 bpm will be known as bradycardia. And the early discharge of the node differing from the normal sinus will cause the atrial premature condition [9].
In the case of atrial fibrillation the action potential fires very rapidly inside the pulmonary veins or atrium in a very hasty manner, as a result it attains a very fast atrial rate, about 450 to 610 bpm [11]. Since the atrial action potential regularly attempts to conduct through the AV node, but since the AV node becomes intermittently refractory allowing only few atrial action potentials to reach the ventricles. And this is the main reason that in spite of atrial rate reaching 450 to 610 bpm the ventricular rate is still around 110 to 250 bpm.
The atrial fibrillation can further be classified under various following categories such as:- (i) Paroxysmal atrial fibrillation, that occurs for some time and then stops automatically (ii) Persistent atrial fibrillation, that does not stops by itself, but can be corrected. (iii) Long standing persistent atrial fibrillation, that does not stops by itself and cannot be corrected. And based on these types we obtain various type of arrhythmia ECG patterns such as:- atrial fibrillation with normal ventricular rate, atrial fibrillation with bradycardia AND atrial fibrillation with rapid ventricular rate [12,13].
The proposed algorithm and method of this study is as given in the Figure 3, which clearly shows that the author is using an advanced hand held portable ECG recording machine to pick the live signals [14]. As there are number of pharma and electronics giant companies, which are in mass production of portable hand held ECG device, instead of conventional heavy set up of it, which requires trolley or wheels to move it. Brands such as Bionet ECG machine, ChoiceMMed ECG Machines, Welch Allyn ECG, Philips ECG machines, ASPEN ECG Machines, BPL ECG Machines AND GE ECG machine machines are considered to be one of the best ECG machines in Asian Continent.
These portable machines are capable of sending the measured data to the receiver wirelessly at 433 MHz FSK/FM transmitter, having the output power of 30 mW at a transmission speed of 3.2 mbps. And this Trans receiver will be interfaced with the Laptop via RS-232 in the VGA port. In case of the mild/feeble ECG signal, the CRO amplifier can be used to amplify/saturate the signals. Now when the live vital signals have reached the NI LabVIEW Bio medical toolkit, the author very first uses the ECG Feature extractor tool and preprocesses the QRS width for finding the initial abnormalities. The raw signal should be preprocessed in order to gather and extract the maximum information bulk from it. Figure 4 shows the snapshot of the process in which the feature extraction and the preprocessing of the signals is being done. Now this signal is passed with Butterworths, bandpass and Gaussian filter for removing noise [15]. In the next stage the determination of the pulse rate (counting of QRS complex in 10 s and then multiplying it by 6 to get in one minute), the duration of PR and QT interval etc. is done.
A digital multi meter, set on millivolt range is used to pre access the initial voltage of the received ECG signal to verify whether it needs any amplification or not. And by this method more than 53 samples of ECG data signal, each of 60 s length were taken from 53 different persons of different ages and gender, to analyse the response time of the results. Further they were compared by the time taken by the normal ECG reports in which, first the respective ECG chart is seen by the cardiologist, which takes the decision of any problem if incurred [18-20].
Out of all the 53 samples there were around 11 live samples which were found little abnormal or beyond the preset limits as per Table 1. And among these 11 samples, 3 of them were found with serious alarming conditions, for which the author and the team have requested to seek the advice of trained medical cardiologists immediately [21-24].
The DAQ interface of the basic biomedical toolkit of the NI LabVIEW software [26] is used for the recording and analyzing the vital live ECG signals obtained from the human body. In the toolkit the ECG Feature Extractor, Bio signal logger/viewer and HRV analyzer modules are extensively used for this study. For the toolbox designing version 8.5 of the LabVIEW is used. Figure 6 is the real snapshot of the actual designed toolbox for the early detection of arrhythmia. In this the normal preset values of the ECG signal parameters are preloaded, as given in the Table 1.
As seen in the figure above after feature extraction and preprocessing of the live ECG signals, these are subjected to the DAQ module of the LabVIEW 8.5, where their QRS complex, PR interval, QT interval, heart beat etc. are continuously recorded and compared with the already loaded normal values. As soon as any of the parameters vary beyond the normal range, as seen in the figure there are visual LEDs and audible beeps to notify or warn the cardiac expert about the alarming condition of the patient.
Similarly we have innumerable examples of the cardiac arrhythmia which is been diagnosed by this method. In some of the cases we see a irregularity of the rhythm as well as baseline wandering, which results in the absurd analysis and become an another example of atrial fibrillation (arrhythmia) as shown in the Figure 8, which depicts an actual trace of arrhythmia with irregular rhythm.
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