These two are most likely related. Line 20 in the original example contained:
*met(C)
These are used to show the C mensural sign, which in modern form is
*met(c)
meaning common-time. This line comes from the prototype that you were starting with, and should be deleted since you want to show the 3/4 time signature, and not replace it with a metric symbol, such as *met(c) for common-time or *met(c|) for cut-time.
After removing the metric symbol line (I think), the autobeam filter was working. However, I see there is a limitation in the filter, where it will not process the last measure in the score if there is no terminating barline. So only one beam in the pickup measure was being beamed, and the beam in the second measure was not. Typically music will have a final barline, but I can fix the case where there is no ending barline (submit an issue on humlib, as I will forget -- maybe I can fix this problem in about two weeks).
> 6. I tried using { and } to indicate phrasing, but the viewer renders this as upper left corner and upper right corner. Is that expected?
Yes, It becomes difficult to separate articulation slurs and phrasing slurs in piano music, in particular. There is not a distinction in any graphical editor, so import into Humdrum via MusicXML will always be articulation slurs. So the default style of {} for analytic/phrase slurs is the open brackets style. In your example, these are articulation slurs (phrasing slurs would most likely cause two levels of slurs to be present: one for articulation and another for phrasing slurs which would be longer).
To change the notation style of {} analytic/phrasing slurs, use the construct:
!!!RDF**kern: phrase: slur
This will make the phrase markers {} look like articulation slurs. Below I add a coloration of the phrase slurs (which is optional):
Various stylings that phrase/analysis slurs can be given:
Phrasing slurs can be hidden by using "none" as the style:
!!!RDF**kern: prase: none
Solid brackets:
!!!RDF**kern: phrase: brack

!!!RDF**kern: phrase: slur, dot

!!!RDF**kern: phrase: slur, dash
!!!RDF**kern: phrase: dash
!!!RDF**kern: phrase: dot