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STAMP is a software package for analyzing taxonomic or metabolic profiles that promotes ‘best practices’ in choosing appropriate statistical techniques and reporting results. Statistical hypothesis tests for pairs of samples or groups of samples is supported along with a wide range of exploratory plots. STAMP encourages the use of effect sizes and confidence intervals in assessing biological importance. A user-friendly, graphical interface permits easy exploration of statistical results and generation of publication quality plots for inferring the biological relevance of features in a metagenomic profile. STAMP is open source, extensible via a plugin framework, and available for all major platforms.

This group is for posting any and all questions related to STAMP. Questions specific to the statistical tests in STAMP and methods for reporting statistical results are also welcomed.

STAMP website: https://beikolab.cs.dal.ca/software/STAMP

STAMP: statistical analysis of taxonomic and functional profiles