Hello,
I'm getting the following error message when I run populations using stacks version 2.68, but it runs fine with 2.67. The catalog was produced under 2.66. Not a big deal since I can just run the old version, but may be some kind of backwards compatibility issue.
populations: src/PopMap.h:343: static void PopMap<LocusT>::populate_internal(LocusT*, Datum**, const Seq&, const std::vector<VcfRecord>&, const VcfHeader&, const MetaPopInfo*, const std::vector<long unsigned int>&) [with LocusT = CSLocus]: Assertion `rec.count_formats() == 2 && strcmp(rec.format0(),"DP")==0' failed.
./makefasta_int.sh: line 23: 3524 Aborted (core dumped)
Dylan O'Hearn