SWAT+ Toolbox modifies parameter values dynamically during its calibration run (often reading from temporary files or a specific reference state). If the baseline values in your SQLite database (project.sqlite) in SWAT+ Editor are slightly different from the initial values SWAT+ Toolbox started with, applying the same relative or percentage change will yield different final values.
Please, compare the final absolute values of your calibrated parameters directly in the calibration.cal file (generated by SWAT+ Toolbox) against the actual values updated in SWAT+ Editor.
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