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Hi,
I am trying to use Mayu software and cannot get it to work. I see that they have the prerequisite to use target decoy fasta database that was used for the database search (use the script reverse_fasta.pl that is located in the folder var/ to create a concatenated target decoy database for your database of choice)
I am the target decoy fasta database generated from TPP for my search. My output seems to only consist of decoys with numbers as opposed to the actual protein names. I suspect that Mayu needs to have the target decoy fasta database in a particular format which has the decoys marked along with the protein header information for Mayu to function appropriately. Has anyone else encountered this problem?