How does RT train work?

10 views
Skip to first unread message

Aarthie Senathirajah

unread,
Mar 23, 2023, 11:56:53 PM3/23/23
to spctools-discuss
Hi I was wondering if there was a tutorial on how to use RT Train? I'm not sure what kind of files it needs as an input. 

I tried inputting my peptideProphet results but keep getting the following error. 
Performing neural net training of retention times... Fitting model to 0 peptides . Not enough good identifications to fit retention time model. Reverting to SSRCalc 1.0 predictions. WARNING: Not enough high probability IDs in run index 

Any papers or tutorial would help. 

Thank you, 
Aarthie
Reply all
Reply to author
Forward
0 new messages