Announcing the official
release of Trans-Proteomic Pipeline (
TPP)
4.7.
0 "Polar Vortex"
We are proud to offer a major update to the Trans-Proteomic Pipeline (
TPP) software,
release 4.7.
0 (
4.7
revision). The software is available for Windows as well as Linux (and
unofficially) through OSX source from all the usual locations (please
see the section below, "Getting the software"). Most users are
recommended to use the Windows installer, which installs and configures
the
TPP and other required software (such as a web server). For advanced
users who need to customize the
TPP, or for those who run
high-throughput experiments, you can download the source code.
In addition to this
release, the Seattle Proteome Center (SPC) is pleased to offer another hands-on
course on the Trans-Proteomic Pipeline (
TPP) this year. It will be held in Seattle from
March 31st-April 4th.
We will focus on the use
of our open-source software tools for the analysis, validation, storage
and interpretation of data obtained from large-scale quantitative
proteomics experiments and methods, multi-dimensional chromatography and
tandem mass spectrometry. Through daily lectures and hands-on
tutorials, course participants should become
proficient in the use of these tools, including PeptideProphet,
iProphet, ProteinProphet, PTMProphet, and other components of the TPP. We will show how you can use Amazon Web Services cloud computing to expand your computing capacity via the TPP.
There will also be instruction on using SPC resources such as
PeptideAtlas, SRMAtlas, and related tools and other software packages.
More information and registration is available at: http://www.proteomecenter.org/nav.course_2014-3.php
==
Release Nodes ==
*
Release notes on the most important new features, changes, and known issues are available at:
"
http://tools.proteomecenter.org/wiki/index.php?title=TPP:4.7.0_Release_Notes"
== Getting the
TPP Software ==
* Download the
TPP version
4.7.
0 native windows installer from the Sashimi SourceForge project file
release page:
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