Currently, no. My preferred solution on macOS/Ilnux is to set up symlinks to the modules in other directories: ln -s [target] [link]
So in your modules/ directory you'd have:
modules/
|_ module1/
|_ module2/
|_ module3/ --> /path/to/somewhere/module3
|_ module3/ --> /path/to/somewhere/else/module4
Alex