TRUE/FALSE error code help

[Carrie Hall]

Good morning!

Can anyone help me with this error code?

Starting Analysis...
    iter    sigma   lam0   beta    psi N
Error in if (runif(1) < exp(sum(rowsum(llvector.new - llvector, indid)[z ==  :
  missing value where TRUE/FALSE needed

I have checked my trap deployment file and my grid file, and I cannot find any missing 1/0 in any of my cells.  Any ideas?

Thanks,
Carrie Hall

[ravi shankar parameshwaran]

Carrie,
Can you check the discussion forum for this topic.
I guess the error is discussed under the following heading:

"Missing value where TRUE/FALSE needed" error

I am giving the quoted answer below
"This error usually occurs when "Animal Capture Details File" has
unexpected data. Ensuring the ANIMAL_ID numbers are sequential
(without an animal ID number being 'skipped’) in the Animal Capture
Details File resolves the error. "

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[arjungswamy .]

Thanks Ravi. Carrie, do let us know if you face more problems.

Regards
Arjun

[Carrie Hall]

Thanks, Ravi and Arjun.  I am still not having any luck.  The odd thing is, I ran a model that worked perfectly two weeks ago, but as I am trying again with a new dataset, I keep getting this error.  I have checked the consecutive animal ID numbers, and everything is correct.  (I can't see how this would be the case, but this isn't a problem with a Windows 10 upgrade, is it?  When the model was working properly, I was running Windows 8, but one of my students upgraded the computer to Windows 10 and now it isn't working.)  I even tried uninstalling R and reloading SPACECAP, but no luck.

Cheers,
Carrie

[arjungswamy .]

Hi Carrie: do send your input files to my email address directly and also to Ravi's email ID. Either one of us can check.

Arjun

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[ravi shankar parameshwaran]

Carrie, It would be good if you can send the input files as Arjun suggested.

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[ta...@cheetah.org]

Hello all,

I am getting the exact same error code as the one posted here by Carrie Hall. Is went back and sorted the Animal_Ids sequentially but still get the same error. By any chance was this error overcome and if so how?

Thanks
Tarik Bodasing

[ravi shankar parameshwaran]

All consecutive numbered individuals until the maximum numbered individual should be present.

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[Tarik Bodasing]

Hi Ravi

Id really appreciate if you could have a look at my data file. It is attached below. As you can see, all 24 cats are present and listed sequentially. Perhaps there is something else that I have missed? It is the first time I am using SPACECAP to run SECR analysis.

Thanks very much.

Regards

Tarik

[ravi shankar parameshwaran]

Dear Tarik,

The problem was with your trap file. It seems the columns corresponding to X_Coord and Y_Coord are interchanged.

[Tarik Bodasing]

Thanks very much Ravi. I really appreciate that.

Kind regards

Tarik