Biotechnology Cheat Sheet Filetype Pdf

[Jarvarious Hunsaker]

HeyBrilliant idea to have a cheat code. but this list will go endless unless you give sub categories, like the cheat code for researchers working in bioalgorithm development, genomics, data analysis etc... this will make it more organised.

-1 my apologies to Pierre as my objection is rather pedantic; if you are looking at coordinates relative to the forward strand (e.g. Refgene), then a gene on the reverse strand would be 5' right and 3' left.

interesting idea .. but off the top of my head I can only think of fastq (1)-> bam (2)-> vcf (3) -> annotated SNPs list of which the path taken depends on the sofware used to (1) map/align (2) call SNPs etc ... Are there file formats that you are thinking about?

Maybe some simples are the interconversion of fastq and fasta+qual; fastq (qual solexa) to fastq (sanger and so forth); conversion of annotation files like EMBL, GBK into each other and or gff; conversion of all sorts of IDs (but there are some good tools for that)....and may be some more....

"At present, about one-third of the human genome appears to be transcribed" just the amount of surfing I had to do and still not find that number is evidence enough that a genomics cheat sheet would be handy thing

for R & Regex I already have separate cheatsheets on my desk. One thing I am missing tough, is a cheatsheet for Regex, referring to in which environment one has to escape which characters and back-references (\ or $)

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