Running SMuin on smaller dataset

[izaak.c...@gmail.com]

I am interested in profiling SMuFin on our system, however the computing resources available to me are limited and I cannot work with healthy and tumour reads covering the whole human genome in 30x coverage.

I am therefore after a smaller dataset than the whole human genome that i can process with SMuFin.
I wanted to confirm my assumption that the dataset provided online is already smaller than used in Valentí et al, Nature Biotech. 2014; as it only covers chr22 of the genome?

Regards,

Izaak

[SMuFin]

Dear  Izaak,

You are right. The example is only the chr22.

Best regards,
Montse

[izaak.c...@gmail.com]

Thankyou for the help!