I’ve always had local storage mounted in the same place, in /tmp. In LSF clusters, I just let LSF’s lim get on with autodetecting how big /tmp was and setting the tmp resource automatically. I presume SLURM can do the same thing, but I’ve never checked.
Tim
--
Tim Cutts
Scientific Computing Platform Lead
AstraZeneca
Find out more about R&D IT Data, Analytics & AI and how we can support you by visiting our Service Catalogue |
AstraZeneca UK Limited is a company incorporated in England and Wales with registered number:03674842 and its registered office at 1 Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge, CB2 0AA.
This e-mail and its attachments are intended for the above named recipient only and may contain confidential and privileged information. If they have come to you in error, you must not copy or show them to anyone; instead, please reply to this e-mail, highlighting the error to the sender and then immediately delete the message. For information about how AstraZeneca UK Limited and its affiliates may process information, personal data and monitor communications, please see our privacy notice at www.astrazeneca.com
Hi,
This may help.
job_container.conf
--------
# All nodes have /localscratch but for some_nodes2 it is mounted as NVME.
AutoBasePath=true
BasePath=/localscratch
Shared=true
# Some nodes have /localscratch1 configured, as localscratch is actually taken by a valid local device setup
NodeName=some_nodes[9995-9999] AutoBasePath=true BasePath=/localscratch1 Shared=true
# Some_nodes2 where we want to use local NVME mounted at localscratch. If this is nvidia kit, we may not want /dev/shm so explicit /tmp
NodeName=some_nodes2[7770-7777] Dirs="/tmp" AutoBasePath=true BasePath=/localscratch Shared=true
David
----------
David Simpson - Senior Systems Engineer
ARCCA, Redwood Building,
King Edward VII Avenue,
Cardiff, CF10 3NB
David Simpson - peiriannydd uwch systemau
ARCCA, Adeilad Redwood,
King Edward VII Avenue,
Caerdydd, CF10 3NB
From:
Jake Longo via slurm-users <slurm...@lists.schedmd.com>
Date: Wednesday, 4 September 2024 at 16:19
To: slurm...@schedmd.com <slurm...@schedmd.com>
Subject: [slurm-users] Configuration for nodes with different TmpFs locations and TmpDisk sizes
|
External email to Cardiff University - Take care when replying/opening attachments or links. |
|
Nid ebost mewnol o Brifysgol Caerdydd yw hwn - Cymerwch ofal wrth ateb/agor atodiadau neu ddolenni. |