More work on this removes some old unused Javascript, and now also handles the errors which occur when the user inputs a scribbly line using the "Ignore stroke order" option.
A ridiculous amount of cross-hatching will also send a message:
These messages only relate to the "Ignore stroke order" choice. Prior to this update, the error was being returned, but it was not being handled at all, so the user would have just got a blank answer box.
I haven't updated the Javascript version number for these changes, so a page reload might be required.
The last of the "alerts" (popup windows where you have to press OK to continue using the site) has now gone, and all user messaging is now carried out via the above message box (the brown part). Work on improving the design will continue, obviously.