http://bioware.ucd.ie/~compass/Datasets/slimprints/LD7d3x/LD7d3x.stdoutModeller not installed
Q03768
slimsearch_dir:/home/compass/public_html/Databases/SLiMSearch2 does not exist please. Please fix path in ./settings/utilities.ini
dssp_dir:/home/compass/public_html/Databases/Structures/dssp does not exist please. Please fix path in ./settings/utilities.ini
pdb_dir:/home/compass/public_html/Databases/Structures/pdb does not exist please. Please fix path in ./settings/utilities.ini
phosphoSitePlus:/disk3/Databases/Modification/phosphoSite.tdt does not exist please. Please fix path in ./settings/utilities.ini
| Q03768 loaded | Alignment exists |
Running conservation
slimsearch_dir:/home/compass/public_html/Databases/SLiMSearch2 does not exist please. Please fix path in ./settings/utilities.ini
dssp_dir:/home/compass/public_html/Databases/Structures/dssp does not exist please. Please fix path in ./settings/utilities.ini
pdb_dir:/home/compass/public_html/Databases/Structures/pdb does not exist please. Please fix path in ./settings/utilities.ini
phosphoSitePlus:/disk3/Databases/Modification/phosphoSite.tdt does not exist please. Please fix path in ./settings/utilities.ini
slimsearch_dir:/home/compass/public_html/Databases/SLiMSearch2 does not exist please. Please fix path in ./settings/utilities.ini
dssp_dir:/home/compass/public_html/Databases/Structures/dssp does not exist please. Please fix path in ./settings/utilities.ini
pdb_dir:/home/compass/public_html/Databases/Structures/pdb does not exist please. Please fix path in ./settings/utilities.ini
phosphoSitePlus:/disk3/Databases/Modification/phosphoSite.tdt does not exist please. Please fix path in ./settings/utilities.ini
Problem (list index out of range) with Q03768.orthaln.fas
list index out of range
[('/home/compass/public_html/slimsuite/tools/slimprints3.py', 319, '<module>', 'slimprintsHelper.createMotifs()'), ('/home/compass/public_html/slimsuite/tools/../libraries/ned_SLiMPrints.py', 302, 'createMotifs', '"anchor":sum([float(self.data["anchorScore"][x]) for x in orderedOffsets])/len(orderedOffsets),')]
Error in routine
<br>
Error Type : <type 'exceptions.IndexError'>
Error Value : list index out of range
File : /home/compass/public_html/slimsuite/tools/../libraries/ned_SLiMPrints.py
Method : createMotifs
Line : 302
Error : "anchor":sum([float(self.data["anchorScore"][x]) for x in orderedOffsets])/len(orderedOffsets),