Hi
Yes, I imagine you could get get a parse tree pretty easily from Skulpt.
The steps of the compiler are quite separate, it goes from source text to CST (very verbose parse tree corresponding to productions in the grammar) to AST (a 'standard' ast) and then on to the rest of compilation.
src/ast.js contains the code that builds the AST from the CST. "Sk.astDump" near the bottom of the file actually spits out the ast in debuggable format, which might be a useful starting point.
HTH,
scott