how does AtomStructureEditor::reindex() work?

[Hannes Loeffler]

Hi,

what I am basically wondering is if reindexing would also adjust the
underlying data structures for all bonded information or would only
the immediate indexes be affected. E.g. if I move an Atom to the end
by index would the bonded parameters be updated accordingly. Note:
the molecule has been created through Sire.IO.Amber()..readCrdTop().

Cheers,
Hannes.

[Hannes Loeffler]

Ok, looks like mol.property('connectivity') is updated but none of the
terms hiding in mol.property("amberparameters").