Build Error when deploying to ShinyApps.io

[poiuyrez]

Hi, 

My shiny app works locally. When I try to deploy my app, I get:

Error: Unhandled Exception: Child Task 582229 failed: Error building image: Error building nloptr (1.0.0). Build exited with non-zero status: 1

Any ideas of what could be wrong?

Thank you for your help

[poiuyrez]

This is the full log in case you need it:

Uploading application bundle...DONE

Deploying application: 15347...

Waiting for task: 583387

  building: Parsing manifest

  building: Installing package: stringr (0.6.2)

  building: Installing package: gtools (3.4.1)

  building: Installing package: RColorBrewer (1.0-5)

  building: Building package: nloptr (1.0.0)

################################## Begin Log ################################## 

[2014-07-18T14:44:41.447819758+0000] Installing R package: stringr (0.6.2)

* installing to library ‘/usr/local/lib/R/site-library’

* installing *binary* package ‘stringr’ ...

* DONE (stringr)

[2014-07-18T14:44:43.081847839+0000] Installing R package: gtools (3.4.1)

* installing to library ‘/usr/local/lib/R/site-library’

* installing *binary* package ‘gtools’ ...

* DONE (gtools)

[2014-07-18T14:44:44.627789035+0000] Installing R package: labeling (0.2)

* installing to library ‘/usr/local/lib/R/site-library’

* installing *binary* package ‘labeling’ ...

* DONE (labeling)

[2014-07-18T14:44:45.732192599+0000] Installing R package: RColorBrewer (1.0-5)

* installing to library ‘/usr/local/lib/R/site-library’

* installing *binary* package ‘RColorBrewer’ ...

* DONE (RColorBrewer)

[2014-07-18T14:44:50.039532632+0000] Building R package: nloptr (1.0.0)

/mnt/packages/build /mnt

* installing to library ‘/usr/local/lib/R/site-library’

* installing *source* package ‘nloptr’ ...

** package ‘nloptr’ successfully unpacked and MD5 sums checked

** libs

`"/usr/lib/R/bin/Rscript" --vanilla -e "download.file(url='http://ab-initio.mit.edu/nlopt/nlopt-2.4.tar.gz', destfile='nlopt-2.4.tar.gz')"`

trying URL 'http://ab-initio.mit.edu/nlopt/nlopt-2.4.tar.gz'

Content type 'application/x-gzip' length 2360753 bytes (2.3 Mb)

opened URL

==================================================

downloaded 2.3 Mb

`"/usr/lib/R/bin/Rscript" --vanilla -e "untar(tarfile='nlopt-2.4.tar.gz')"`

rm -rf nlopt-2.4.tar.gz

echo "Installing library to: `pwd`/nlopt-2.4"

echo "Installing library to: `pwd`/nlopt-2.4"

Installing library to: /tmp/RtmptqXC7l/R.INSTALLc109d88d0/nloptr/src/nlopt-2.4

Installing library to: /tmp/RtmptqXC7l/R.INSTALLc109d88d0/nloptr/src/nlopt-2.4

cd nlopt-2.4; \

ed -s isres/isres.c <<< $'H\n,s/sqrt(/sqrt((double) /g\nw'; \

ed -s util/qsort_r.c <<< $'H\n1i\nextern "C" {\n.\nw'; \

ed -s util/qsort_r.c <<< $'H\n$a\n}\n.\nw'; \

./configure --prefix="`pwd`" --enable-shared --enable-static --without-octave --without-matlab --without-guile --without-python --with-cxx CC="`"/usr/lib/R/bin/R" CMD config CC`" CFLAGS="`"/usr/lib/R/bin/R" CMD config CFLAGS`" CPP="`"/usr/lib/R/bin/R" CMD config CPP`" CPPFLAGS="`"/usr/lib/R/bin/R" CMD config CPPFLAGS`" CXX="`"/usr/lib/R/bin/R" CMD config CXX`" CXXFLAGS="`"/usr/lib/R/bin/R" CMD config CXXFLAGS`" CXXCPP="`"/usr/lib/R/bin/R" CMD config CXXCPP`"; \

make; \

make install; \

ls | grep -v ^include$ | grep -v ^lib$ | xargs rm -rf; \

    rm -rf .libs;

cd nlopt-2.4; \

ed -s isres/isres.c <<< $'H\n,s/sqrt(/sqrt((double) /g\nw'; \

ed -s util/qsort_r.c <<< $'H\n1i\nextern "C" {\n.\nw'; \

ed -s util/qsort_r.c <<< $'H\n$a\n}\n.\nw'; \

./configure --prefix="`pwd`" --enable-shared --enable-static --without-octave --without-matlab --without-guile --without-python --with-cxx CC="`"/usr/lib/R/bin/R" CMD config CC`" CFLAGS="`"/usr/lib/R/bin/R" CMD config CFLAGS`" CPP="`"/usr/lib/R/bin/R" CMD config CPP`" CPPFLAGS="`"/usr/lib/R/bin/R" CMD config CPPFLAGS`" CXX="`"/usr/lib/R/bin/R" CMD config CXX`" CXXFLAGS="`"/usr/lib/R/bin/R" CMD config CXXFLAGS`" CXXCPP="`"/usr/lib/R/bin/R" CMD config CXXCPP`"; \

make; \

make install; \

ls | grep -v ^include$ | grep -v ^lib$ | xargs rm -rf; \

    rm -rf .libs;

Newline appended

Newline appended

checking for a BSD-compatible install... checking for a BSD-compatible install... mkdir: cannot create directory `conftest.dir': File exists

/usr/bin/install -c

checking whether build environment is sane... /usr/bin/install -c

checking whether build environment is sane... yes

yes

checking for a thread-safe mkdir -p... checking for a thread-safe mkdir -p... /bin/mkdir -p

checking for gawk... no

checking for mawk... mawk

checking whether make sets $(MAKE)... /bin/mkdir -p

checking for gawk... no

checking for mawk... mawk

checking whether make sets $(MAKE)... yes

yes

checking whether make supports nested variables... checking whether make supports nested variables... yes

yes

checking whether to enable maintainer-specific portions of Makefiles... no

checking for gcc... checking whether to enable maintainer-specific portions of Makefiles... gcc -std=gnu99

no

checking for gcc... gcc -std=gnu99

checking whether the C compiler works... checking whether the C compiler works... yes

yes

checking for C compiler default output file name... checking for C compiler default output file name... a.out

a.out

checking for suffix of executables... checking for suffix of executables... 

checking whether we are cross compiling... checking whether we are cross compiling... no

no

checking for suffix of object files... checking for suffix of object files... o

o

checking whether we are using the GNU C compiler... checking whether we are using the GNU C compiler... yes

yes

checking whether gcc -std=gnu99 accepts -g... checking whether gcc -std=gnu99 accepts -g... yes

yes

checking for gcc -std=gnu99 option to accept ISO C89... checking for gcc -std=gnu99 option to accept ISO C89... none needed

none needed

checking whether gcc -std=gnu99 understands -c and -o together... checking whether gcc -std=gnu99 understands -c and -o together... yes

yes

checking for style of include used by make... checking for style of include used by make... GNU

GNU

checking dependency style of gcc -std=gnu99... checking dependency style of gcc -std=gnu99... mkdir: cannot create directory `conftest.dir': File exists

cp: cannot create regular file `conftest.dir/depcomp': File exists

mkdir: cannot create directory `sub': File exists

gcc3

gcc3

checking for gcc -std=gnu99 option to accept ISO C99... checking for gcc -std=gnu99 option to accept ISO C99... none needed

none needed

checking for gcc -std=gnu99 option to accept ISO Standard C... (cached) checking for gcc -std=gnu99 option to accept ISO Standard C... (cached) none needed

none needed

checking whether ln -s works... checking whether ln -s works... yes

checking whether make sets $(MAKE)... yes

checking whether make sets $(MAKE)... (cached) yes

(cached) yes

checking build system type... checking build system type... x86_64-unknown-linux-gnu

x86_64-unknown-linux-gnu

checking host system type... checking host system type... x86_64-unknown-linux-gnu

x86_64-unknown-linux-gnu

checking how to print strings... checking how to print strings... printf

printf

checking for a sed that does not truncate output... checking for a sed that does not truncate output... /bin/sed

/bin/sed

checking for grep that handles long lines and -e... checking for grep that handles long lines and -e... /bin/grep

/bin/grep

checking for egrep... checking for egrep... /bin/grep -E

/bin/grep -E

checking for fgrep... checking for fgrep... /bin/grep -F

/bin/grep -F

checking for ld used by gcc -std=gnu99... checking for ld used by gcc -std=gnu99... /usr/bin/ld

/usr/bin/ld

checking if the linker (/usr/bin/ld) is GNU ld... checking if the linker (/usr/bin/ld) is GNU ld... yes

yes

checking for BSD- or MS-compatible name lister (nm)... checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B

/usr/bin/nm -B

checking the name lister (/usr/bin/nm -B) interface... checking the name lister (/usr/bin/nm -B) interface... BSD nm

BSD nm

checking the maximum length of command line arguments... checking the maximum length of command line arguments... 3458764513820540925

3458764513820540925

checking whether the shell understands some XSI constructs... checking whether the shell understands some XSI constructs... yes

checking whether the shell understands "+="... yes

checking whether the shell understands "+="... yes

yes

checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop

checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop

func_convert_file_noop

checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... checking for /usr/bin/ld option to reload object files... -r

func_convert_file_noop

checking for /usr/bin/ld ################################### End Log ################################### 

Error: Unhandled Exception: Child Task 583388 failed: Error building image: Error building nloptr (1.0.0). Build exited with non-zero status: 1

[Andy Kipp]

Hi,

This likely isn't working because the nloptr requires the nlopt library to installed on our servers, but we currently don't install it. We can probably add support for this in the future.

-Andy

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