Inferring Tumor purity (High or low)

[satishkumar Ranganathan Ganakammal]

Hello,

I have generated results from the sequenza, And I have cellularity value from the file :

sample_confints_CP.txt

How do I determine if purity (high vs low) of the tumor sample from this file? Is there a document for reference on how to infer this?

Regards,

Satish

[satishkumar Ranganathan Ganakammal]

Hello,

I am not able to find relationship between cellularity and tumor purity from paper or the github resource. Can you explain how tumor purity of the sample can be assessed from sequenza results.

TIA,

Satish