sequenceserver

Dear colleagues, Thank you for using SequenceServer - we are very proud that our tool is helping to

Hello, I hope everyone is well. Heads up that we're migrating this discussion to https://support.

I am unable to start Sequence server in Docker in WSL2 # docker fetch wurmlab/sequenceserver docker:

Hello, I am sorry I had missed this thread somehow. Ensuring sequenceserver can be accessed on

Thank you Yannick, Uninstalled the 3.1.0 and used the built-in ruby 2.6.8 as suggested. Problem is

Not really. I would try Apache config, as suggested by yourself. If anything comes to light that can

Hi Sander, I don't have experience with docker on windows, but maybe the following stack overflow

Hi Josh, I haven't! I'm not as familiar with that side of the process--thank you for the

Hmm, the error message suggests that sys is returning an empty array on the second invocation. That

Hi Michelle, It seems you are using a very old version of sequenceserver (version 1.0.5). It is

Hi Pratima, You should report the error to PHI-base instead. There is a 'Contact us' link in

Hi Divya, It seems you are using a very old version of sequenceserver (version 1.0.5). It is possible

Hi, I am using sequence server 1.0.14 on Apache. I am trying to connect it now with Jbrowse via links

Indeed it does, I missed that, rtfm fail. Works now, thanks! On Monday, November 22, 2021 at 9:09:48

NoMethodError - undefined method `root' for nil:NilClass: /var/lib/gems/2.7.0/gems/sequenceserver

Hi Michal, thanks for the message. In the world of BLAST, "hit" means a sequence with one

I have responded on the corresponding Github issue - https://github.com/wurmlab/sequenceserver/issues

Hello and thank you for catching this. This also happens on my Mac in Safari. I'veopened an issue

Hi Gagan, Thank you for sharing. I suppose the CSP setting might have prevented the javascript bundle

Your error message suggests that your sequenceserver installation is using blast+/2.9.0 as well. So

If I may to add Yannick's message: To get a sense of equivalent results on the command line, you

Dear Wadzani, you need to check with the people/administrators that are running the specific

Thanks - this looks like its specific to a particular SequenceSErver installation - something the

Hi Tiziana, How did you solve the issue? The same thing happened to me when I used SequenceServer on

Hi, I installed sequenceserver on a cloud ubuntu virtual machine on Friday and it was working

Dear, Priyam I got it nicely! thank you so much. Ragards, Pavita On 1 Jun BE 2564, at 15:51, Anurag

Dear Yannick, Thank you for replying - yes, it's true that this could cause potential

Are you the admin of brassicadb.cn? Because this issue requires attention of the person who created/

Hi, We have this feature in version 2.0 of SequenceServer: https://groups.google.com/g/sequenceserver

You can do so by visiting http://server-ip:4567 in your browser. You may need to make sure that the

Hi Tereza, I think we have seen this error before. If I remember correctly, this happens when