Yes I can look into adding these for our next version. If you are
using the FAIRDOMHub we can get it updated quite quickly outside
of the release schedule.
I'll try and get this done later today or tomorrow.
That's super, thank you very much! I shall be using the FAIRDOMHub very soon for the final migration; at the moment, I am using the Docker SEEK container to test everything locally before I am completely confident that my migration application is working properly. Many thanks.
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The new model types have been added, and are now available on the
FAIRDOMHub. They will be included as part of the upgrade for the
next seek version.
I also noticed and consolidated a couple of differences between
the fairdomhub and a default SEEK installation, so they should now
be the same.
"Field Modelling Markup Language (FieldML)" becomes "FieldML",
"KEGG Markup Language (KGML)" becomes "KGML"
"VCell" becomes "Virtual Cell Markup Language (VCML)"
If you need to use this immediately in your local docker container, there is a development image fairdom/seek:1.7-dev . You will need to step into the container and run a small rake command:
> docker exec -it seek bash
> bundle exec rake db:seed:model_formats
hopefully this helps,
That's fantastic, thank you very much!
Thanks again for those updates. I realised I made a mistake with my original request, sincere apologies. Please would it be possible to rename the 'MathML/Smile' format to simply 'MathML' and would it be possible to add another additional format for 'Simile XML v3' please? Very sorry for the confusion, I hope it doesn't cause too much bother. Many thanks.
I updated this on Friday, and updated the FAIRDOMHub.