[SciPy-user] Scipy 0.7.0 Beta and umfpack

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Fago, Matt - AES

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Jan 12, 2009, 4:26:10 PM1/12/09
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I'm testing SciPy 0.7.0 b1 for Fedora 9 and have come across an issue:

>>from scipy.interpolate.fitpack import splev

gives the warning:

/usr/lib64/python2.5/site-packages/scipy/sparse/linalg/dsolve/linsolve.py:20:
DeprecationWarning: scipy.sparse.linalg.dsolve.umfpack will be removed, install
scikits.umfpack instead
' install scikits.umfpack instead', DeprecationWarning )

I've searched on this topic and found a similar discussion involving linsolve:

http://article.gmane.org/gmane.comp.python.scientific.devel/9359

that was fixed in svn trunk revision 5214, but evidently I'm seeing a separate issue?


Thanks,
Matt

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Nils Wagner

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Jan 12, 2009, 4:54:52 PM1/12/09
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Python 2.6 (r26:66714, Dec 3 2008, 10:55:18)
[GCC 4.3.2 [gcc-4_3-branch revision 141291]] on linux2
Type "help", "copyright", "credits" or "license" for more
information.
>>> from scipy.interpolate.fitpack import splev
>>> import scipy
>>> scipy.__version__
'0.8.0.dev5446'

Pauli Virtanen

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Jan 12, 2009, 4:54:28 PM1/12/09
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Mon, 12 Jan 2009 16:26:10 -0500, Fago, Matt - AES wrote:
> I'm testing SciPy 0.7.0 b1 for Fedora 9 and have come across an issue:
>>>from scipy.interpolate.fitpack import splev
>
> gives the warning:
>
> /usr/lib64/python2.5/site-packages/scipy/sparse/linalg/dsolve/
linsolve.py:20:
> DeprecationWarning: scipy.sparse.linalg.dsolve.umfpack will be removed,
> install scikits.umfpack instead
> ' install scikits.umfpack instead', DeprecationWarning )
[clip]

> that was fixed in svn trunk revision 5214, but evidently I'm seeing a
> separate issue?

It's the same issue. The fix didn't make it into the beta (but will be in
rc/final).

--
Pauli Virtanen

Fago, Matt - AES

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Jan 13, 2009, 11:59:15 AM1/13/09
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Pauli Virtanen wrote:
> It's the same issue. The fix didn't make it into the beta (but will be in
> rc/final).

Great, thanks. I've let the Fedora SciPy packager know.

- Matt

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